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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918897.1_cds_XP_016468218.1_60883
CDS Infomation

[gene=LOC107790771] [db_xref=GeneID:107790771] [protein=nicalin-like] [partial=3'] [protein_id=XP_016468218.1] [location=join(12354..12642,18110..18273,19249..19352,20257..20323,21433..21525,21608..21772,21861..22001,22100..22177,24395..24507,24594..24654,26129..26296,26405..>26458)] [gbkey=CDS]
Sequence

ATGGCGAATTATCATAGAAAACCAGCAGTAATAGACCCGATGTACTACCCAGTGATCGCT
TTAATCATCGCCGTTATCGCCTTCGTTGAGCTCTCTGACGCCGTCACCGTCGTCGACGTC
TACCGGCTTGTTCAGTACGATATCTCCGGCGTCCCCTTCGGTTCTCGGCTCGCTGTTCTT
AATCATCACGCTGGCTCGTCCTTATTTGCTTCTGGTGGCTCCGGTTCCGATCTCTCTCGT
ACGGTTCTCATTCTTCCGGTTAGGGAATTGGATCCCACTCTCATTAAAGAATATATTGAA
CAGAAAAATCTATTAGGGGGTTTACTGCTTTTACTCCCCCCAAAACTTAGTCCAGAAAAC
CTAGACAACGCATTTGGTGCTGATGAGGGTATTAACAGCCTGATGAGCAAATTGGCTGAG
TTGGAACGGTTGCTTACGCATTCTAATATCCCTTATCCTGTATATTTTGCTTTTGAGGAT
GACAATATCAATGCTGTACTAGCTGAAGTTAAGAGAAACGATGCTAGTGGTCAACCTGCA
ACAGCTACCACAGGCGGCTACAAGCTTGTTGTTGCTGCCTCAGATCCTAAGAGAATTGCG
TCCCCCAACATTGCAAATATTCAGGGATGGTTACCAGGACTTAAAGTTGATGGAGACTCA
AATCAACTCCCAACTATTGCCATAGTGGCTTCATATGACACATTTGGGGCTGCGCCAACA
TTGTCAGTGGGAAGTGATAGCAATGGAAGTGGTGTAGTGGCACTTCTTGAAATTGCTAGG
TTGTTTTCTGCTCTATATTCAAATCCTAAAACTAGAGGTAGATATAATTTACTCTTTGGA
TTGACATCTGGTGGACCGTATAACTACAATGGAACTCAGAAGTGGCTTCGGAGTTTTGAC
CAGCGTCTACGTGAGAGTATAGACTATGCTATCTGCTTGAATAGTGTTGGGTCCCTTGGC
AATGAGTTACGTCTTCATGTGTCCAAACCTCCAGAAAATGCTTACATACAGCAGATATTC
CGGGGTTTCTCTACCATAGCAGAAGAATTGGGCCTTCAAGTTGGTCTTAAGCACAAGAAA
ATAAACATCTCGAATCCTCGAGTAGCCTGGGAGCATGAACAGTTTTCAAGGTTGAGAGTC
ACTGCAGCAACACTATCTGAACTTTCTGCTGCACCTGAATTACTGGAAAGCACAGGACAT
CTGGCTGATAACAGACATTTTGTCAGTGAAGCCTCAATCATTCGAAGTGTCAAGCTTGTT
GCTGAAAGTCTAGCGAGACACATTTATAACCAGGAGCAGAAAAGCATAAGCATATTTGCA
GACGATAGTAGTTTAGCCGTCAATCCTTCCTACATAAGGTCTTGGCTAGATCTTTTATCT
ACAACACCTCGAGTGGCACCTTTTCTTTCAAAAAATGACCCGCTTATTAAGGCACTGGAA
AAGGAATTAGCTGATCATACTGCAGAGGTGAATGTACAGCATGAGACTCTAGATGGA

Peptide Sequence

PEP ID

XP_016468218.1
PEP Infomation

PREDICTED: nicalin-like, partial [Nicotiana tabacum]
Sequence

MANYHRKPAVIDPMYYPVIALIIAVIAFVELSDAVTVVDVYRLVQYDISGVPFGSRLAVL
NHHAGSSLFASGGSGSDLSRTVLILPVRELDPTLIKEYIEQKNLLGGLLLLLPPKLSPEN
LDNAFGADEGINSLMSKLAELERLLTHSNIPYPVYFAFEDDNINAVLAEVKRNDASGQPA
TATTGGYKLVVAASDPKRIASPNIANIQGWLPGLKVDGDSNQLPTIAIVASYDTFGAAPT
LSVGSDSNGSGVVALLEIARLFSALYSNPKTRGRYNLLFGLTSGGPYNYNGTQKWLRSFD
QRLRESIDYAICLNSVGSLGNELRLHVSKPPENAYIQQIFRGFSTIAEELGLQVGLKHKK
INISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGHLADNRHFVSEASIIRSVKLV
AESLARHIYNQEQKSISIFADDSSLAVNPSYIRSWLDLLSTTPRVAPFLSKNDPLIKALE
KELADHTAEVNVQHETLDG

Transcript Sequence

Gene sequence data has not been registered.